Can BOLT-LMM_v2.3.2 handle BGEN v3 format data released by UK biobank?

Question

[1434273482]

Hello all,

Can BOLT-LMM_v2.3.2 handle BGEN v3 format data released by UK biobank?

The software had implemented multi-threaded processing for files in the BGEN v1.2 format used in the UK Biobank N=500K release, but I cannot run it on BGEN v3 format data.

Thanks for your help. Best wishes.

Answer 1

[y.n.ning]

I'm not sure about v2.3.2, but I'm using v2.3.4 and it can.