Can BOLT-LMM_v2.3.2 handle BGEN v3 format data released by UK biobank?
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3.5 years ago
1434273482 ▴ 10

Hello all,

Can BOLT-LMM_v2.3.2 handle BGEN v3 format data released by UK biobank?

The software had implemented multi-threaded processing for files in the BGEN v1.2 format used in the UK Biobank N=500K release, but I cannot run it on BGEN v3 format data.

Thanks for your help. Best wishes.

UK Biobank BGEN BOLT-LMM gene genotype • 1.1k views
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20 months ago
y.n.ning • 0

I'm not sure about v2.3.2, but I'm using v2.3.4 and it can.

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