I want to use Poly A and ribosomal rna depleted RNA seq to detect Non coding RNA. is there any way to know (without mapping) whether dataset is Whole trascriptomic data or not!!
Please help me in this issue!!!
Thanks in advance!!!!
Advanced query search builder for NCBI SRA can be used for polyA and RNASeq (I could not find the rna depleted part). In NCBI -> SRA -> Advanced search -> Builder
selection -> polya AND source -> transcriptomic plus you can add the organism or tax tree
selection -> polya AND source -> transcriptomic
appreciate your help @microfuge
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