can mummer align 5 strains (13 Mb each strain) with Reference genome with same size (13 Mb) all togother?
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4.7 years ago

can mummer align 5 strains (13 Mb each strain) with Reference genome with the same size (13 Mb) altogether?he

my objective is to search for SNPs among 6 strains with whole-genome size 13 Mb for each

i used the fasta file for each strain which deposits at NCBI

Raw data for 6 strains already deposited at NCBI in Fasta file

alignment • 757 views
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