Entering edit mode
5.2 years ago
XBria
▴
90
Hi everyone,
I am working with a data set of total rna. Already extracted a list of Biomart from ensemble website (gene stable IDs , gene Type, and Gene name). Need to only extract the Mrna s of the data to do DEG analysis. Please let me know which IDs are for mrna and how may I chack them ?
thanks,
nicely explained here IMO:
https://reasoniamhere.com/2013/09/16/awk-gtf-how-to-analyze-a-transcriptome-like-a-pro-part-1/