I have fasta sequence of sacCer3 strain of yeast downloaded form http://hgdownload.cse.ucsc.edu/goldenPath/sacCer3/chromosomes/.
Because I need to mapping mu sequence data to this specie, I have to merge them together. Could you tell me how to merge them ( chrI.fa, chrII.fa, chrIII.fa ...) ? May I cat them all together directly by using the script (cat *.fa > all.fa) ?
Any help would be great appreciated.