Hi, I am new to sequencing analysis. I got the vcf file and need some help to understand the meaning. In the last two columns, there are some rows like:
I know 0|1 represent hetero, and CNADJ is the copy number of the adjacency (not sure what it is) but why there is only one number (2) after the colon? I was expecting two numbers like 0|1:2,1.
Also, there are some rows show:
what does -1 mean here? Thanks very much!