Hello everyone, I'm using salmon for the alignment of SE sequencing fastq file. at some point I have this output:
[warning] Fragment GC bias correction is currently *experimental* in single-end libraries. Please use this option with caution.
It's not clear to me what does it mean to use this parameter ( --gcBias ) with caution, what happens if I use it? can I or not?
Thank you, in particular to who made this amazing tool