We are currently retooling a pipeline to do consensus calling between 3 variant callers, Mutect2, strelka, and lancets. We would like some thoughts on the best way to do consensus calling on the VCF outputs. We have some older custom scripts that are very convoluted, and have also looked at selectvariants from GATK. Any input is appreciated.
Question: Methods for Doing Consensus Variant Calling between multiple callers
28 days ago by
djevanclark • 20
djevanclark • 20 wrote:
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