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Question: qualimap error:Exception in thread "main" java.awt.AWTError: Can't connect to X11 window server using 'localhost:22.0' as the value of the DISPLAY variable.
0
gravatar for Nich
17 months ago by
Nich • 10
Nich • 10 wrote:

I encountered this error during the use of qualimap:

Exception in thread "main" java.awt.AWTError: Can't connect to X11 window server using 'localhost:22.0' as the value of the DISPLAY variable.

I found the relevant solution on the official website of qualimap, but I don't know how to implement it.

Qualimap is a binary file with no parameters to receive java configuration during execution.

Qualimap.jar cannot be started using "java -jar qualimap.jar".

Can someone help me to look at it?
qualimap x11 • 637 views
ADD COMMENT • link •
modified 17 months ago by Pierre Lindenbaum ♦ 133k • written 17 months ago by Nich • 10
0
gravatar for Pierre Lindenbaum
17 months ago by
Pierre Lindenbaum ♦ 133k
France/Nantes/Institut du Thorax - INSERM UMR1087
Pierre Lindenbaum ♦ 133k wrote:

use a X11-aware terminal. For example, if you're connecting to a server using ssh, use the '-X' option. https://unix.stackexchange.com/questions/12755
ADD COMMENT • link written 17 months ago by Pierre Lindenbaum ♦ 133k

Thanks for your answer! Because I want to use qualimap in my pipline, I hope that qualimap can not display the graphical interface and run the complete process directly in the background. Is there a solution for this?

ADD REPLY • link modified 17 months ago • written 17 months ago by Nich • 10

Additionally it’s possible to use a special option of Java -Djava.awt.headless=true to disable display requirement.

Enabling this option can be performed by setting JAVA_OPTS variable in system or by changing java_options variable in the qualimap script:

java_options="-Djava.awt.headless=true -Xmx$JAVA_MEM_SIZE -XX:MaxPermSize=1024m"

ADD REPLY • link written 17 months ago by WouterDeCoster ♦ 45k
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