How to retrieve protein sequence data for humano in UniProt?
1
0
Entering edit mode
3.1 years ago

Hi,

I tried to retrieve protein sequence data from UniProt site, however, I haven't downloaded the data because is huge files ( about 130GB). I suppose, there are all species in that file.

Is there a manner to download just protein sequence data from UniProt specific for human?

Thank you very much.

Carlos

protein protein sequence UniProt • 588 views
ADD COMMENT
1
Entering edit mode

You can use the advance search option with selecting taxonomy from dropdown and then putting in 9606 (the taxonomy id of human) The autocomplete should suggest accordingly.

ADD REPLY
3
Entering edit mode
3.1 years ago

Yes, you can easily download all human protein sequences.

  1. Go to UniProt homepage.
  2. Limit the search to human proteins by typing in the search box organism:"Homo sapiens (Human) [9606]".
  3. Download the FASTA sequences (Download button).
ADD COMMENT

Login before adding your answer.

Traffic: 1681 users visited in the last hour
Help About
FAQ
Access RSS
API
Stats

Use of this site constitutes acceptance of our User Agreement and Privacy Policy.

Powered by the version 2.3.6