Question: Isoform level TCGA RNA-seq Expression data
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gravatar for deepak18
4 months ago by
deepak1810
deepak1810 wrote:

I have Isoform level RNA-seq data from The Cancer Genome Atlas and I want to check the difference the difference in the level of a particular isoform between cancer and normal samples. Is there any software or R package which I can use to plot a boxplot showing difference in that isoform between normal and cancer sample with p-value?

ADD COMMENTlink modified 4 months ago by igor9.1k • written 4 months ago by deepak1810
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gravatar for igor
4 months ago by
igor9.1k
United States
igor9.1k wrote:

You can try ggpubr.

Example plot:

enter image description here

ADD COMMENTlink written 4 months ago by igor9.1k
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