Question: Isoform level TCGA RNA-seq Expression data
gravatar for deepak18
13 days ago by
deepak180 wrote:

I have Isoform level RNA-seq data from The Cancer Genome Atlas and I want to check the difference the difference in the level of a particular isoform between cancer and normal samples. Is there any software or R package which I can use to plot a boxplot showing difference in that isoform between normal and cancer sample with p-value?

ADD COMMENTlink modified 13 days ago by igor8.3k • written 13 days ago by deepak180
gravatar for igor
13 days ago by
United States
igor8.3k wrote:

You can try ggpubr.

Example plot:

enter image description here

ADD COMMENTlink written 13 days ago by igor8.3k
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