I have got ~40000 MinION reads derived from a virus, whose read length ranges from ~100 to ~34.9k. I would like to re-sample these reads to evaluate the minimum read number enough to detect this virus. As Oxford nanopore reads have no identical read length, I have to take the varying read length into consideration when re-sampling the reads. Are there open soure tools available for this task?
Question: Tools for downsampling/resampling/subsampling Oxford Nanopore reads
5 weeks ago by
nkuyfq • 60
nkuyfq • 60 wrote:
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