I'm trying to extract RNAseq data in Python using the GEOparse package. I used the following code:
import GEOparse gse = GEOparse.get_GEO(geo="GSE84422", destdir="./") data = gse.table
However, I get an error: "AttributeError: 'GSE' object has no attribute 'table'". The package documentation says that table should be a standard attribute of GSE objects (see section 3.3.2). I've been trying to follow this tutorial. Any advice greatly appreciated!