Entering edit mode
4.5 years ago
arozhok
•
0
Running a typical rsem-calculate-expression
command with the --output-genome-bam
option. RNA-seq paired-end. STAR as aligner. Index generated from genome reference for STAR. Everything works, it generates counts and outputs two bam files. Trascriptomic bam looks ok. Genomic bam is a file of size zero bytes. Has anyone encountered this problem?