Assembling problem Galaxy
0
0
Entering edit mode
4.6 years ago
netsam ▴ 10

Hi, I tried to assemble a set of reads directly from a BAM file with Velvet in Galaxy Australia. The reads seems to cover the entire reference sequence of about 1.000 bp, but the assembling failed. I attach an IGB screenshot.

enter image description here

The BAM file was generated with BWA-MEM, inside Galaxy wrapper

Assembly • 597 views
ADD COMMENT
1
Entering edit mode

Please post galaxy related questions to Galaxy help site for prompt help.

In this case you may want to reach out to Galaxy australia support.

ADD REPLY
0
Entering edit mode

Instead of the image hosting provider you are using please use these directions: How to add images to a Biostars post

ADD REPLY

Login before adding your answer.

Traffic: 2359 users visited in the last hour
Help About
FAQ
Access RSS
API
Stats

Use of this site constitutes acceptance of our User Agreement and Privacy Policy.

Powered by the version 2.3.6