Hi all I am new in bioinformatics and need some help. I did a DEG analysis from Trinity transcripts using a de novo reference. First I did a count table using Salmon, then I did DEG analysis using edgeR. Now I would like to annotate the transcripts differently expressed, but I do not how I can to do that. I just tried to get my transcripts differently expressed sequence from fasta file using a ID list, but I can't to do that using grep command (it didn't work). Does someone any idea?
I will appreciate any answer.