ecoPCR won't install on Mac (Mojave 10.14.5)
1
0
Entering edit mode
5.1 years ago
beausoleilmo ▴ 600

I'm trying to install ecoPCR (version 1.0.1) on my mac from this website.

But when I follow the instruction below:

tar -zxvf ecopcr-*.tar.gz
cd ecoPCR/src/
make

I got that series of messages:

global.mk:17: ecopcr.P: No such file or directory
global.mk:17: ecofind.P: No such file or directory
global.mk:17: ecoisundertaxon.P: No such file or directory
gcc -M  -o ecoisundertaxon.d ecoisundertaxon.c
In file included from ecoisundertaxon.c:1:0:
libecoPCR/ecoPCR.h:4:19: fatal error: stdio.h: No such file or directory
compilation terminated.
make: *** [ecoisundertaxon.P] Error 1

How do I make it install properly?

ecoPCR metabarcoding • 1.3k views
ADD COMMENT
2
Entering edit mode
5.1 years ago
GenoMax 146k

You need to install the input output library for GCC. See the answers here for help.

ADD COMMENT
0
Entering edit mode

Cool!! this actually solved my problem:

cd /Library/Developer/CommandLineTools/Packages/
open macOS_SDK_headers_for_macOS_10.14.pkg

The weird thing is that I had Command Line Tools installed, but for some reasons, it didn't work...

ADD REPLY

Login before adding your answer.

Traffic: 1338 users visited in the last hour
Help About
FAQ
Access RSS
API
Stats

Use of this site constitutes acceptance of our User Agreement and Privacy Policy.

Powered by the version 2.3.6