Hello, I'm looking for a solution to reverse complement reads inside of a BAM file. I know that the obvious solution is to reverse complement reads before alignment, however that is not applicable in this case, the Fastx toolkit does not work here and seqkit provided results that weren't accurate for us. Is there any simple awk way to do this or any known software with this capability? Thank you.
Question: Reverse Complement Reads in BAM File
9 months ago by
Viz • 40
Viz • 40 wrote:
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