Understanding assembly graphs
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4.5 years ago
lagartija ▴ 160

Hi,

Do you have any resources to understand assembly graphs better ? After I did my assemblages I get a .gfa file that I can see with bandage for example but I don't understant why I get one graph with all the edges connected when in fact my final assembly has 2 separate contigs. Also the total length doesn't correcpond exactly to my assembly. So if you have any tip to interpret these graph it would come handy.

Cheers,

assembly gfa • 2.8k views
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