I'm not good at statistics, which method will be preferred? Fisher's exact test or Chi Square test with Yates' continuity correction? Any R code can be shared?
Data file (say 1000G_EAS is the frequency from 1000 Genome project of EAS population):
variant,this_study,1000G_EAS rs9934438,0.916,0.885 rs2228001,0.836,0667 rs10655852,0.821,0.571 rs4244285,0.429,0.313 rs3745274,0.402,0.215 rs2108622,0.394,0.214
Thanks a lot!