Question: Best software to visualize a phylogenetic tree coupled to the presence/absence pattern of clusters of orthologous proteins (COGs)
gravatar for Biok
12 months ago by
Biok0 wrote:

Hi everyone,

I am looking for a good comparative genomic tool or R package where it is possible to have a phylogenetic tree on one side and the distribution of COGs across the species on the other. Do you know of a program for this?

Thank you!

assembly sequence R genome • 374 views
ADD COMMENTlink written 12 months ago by Biok0

The best tool is iTOL, unfortunately it's web-based, I couldn't find a standalone software that comes near.

ADD REPLYlink written 12 months ago by Asaf8.4k

Thank you for the recommendation! I will try iTOL.

ADD REPLYlink written 12 months ago by Biok0
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