How to do computational ChIP data mining to find proteins/genes co-expression and interpretation

Question

[isnurain]

I want to computationally elucidate the relevance of a gene/protein (Nuclear Receptors/Transcription Factors) in a particular disease through its co-expression with another protein (Nuclear Receptors/Transcription Factors) using ChIP-seq data from any public databases.

[Ram]

What have you tried on your own?

[ATpoint]

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