DADA2/R Programmer Needed for One-Time Job

Job:DADA2/R Programmer Needed for One-Time Job

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4.5 years ago

espop23 ▴ 60

Need an experienced R-programmer, with experience with DADA-2 and optimising pipelines for biological data.

Have a pipeline that is not delivering to species-level as desired. Need script to be refined to ensure high accuracy, precision, and greater detection.

You much have experience with microbiome data.

Fee: negotiable.

Start time: ASAP.

R microbiome dada2 • 1.2k views

ADD COMMENT • link updated 10 months ago by Ram 43k • written 4.5 years ago by espop23 ▴ 60

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I know this is a job tread but still want to share that in my experience if you can not identify on species level it has much more to do with the sample itself and the used reference then the actual pipeline.

Edit: to test your pipeline for the species identification part you can also just blast all the reads. And compare it to the blasted clusters. It takes time but saves you money

ADD REPLY • link 4.5 years ago by gb ★ 2.2k

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True. I had this problem with a microbial community rich in enterobacteriace.

ADD REPLY • link 4.5 years ago by andres.firrincieli 3.6k

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Hi, I am very happy to help you. May u leave your email?

ADD REPLY • link 4.5 years ago by shangzhenhua08 • 0

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