Hello, I'm fairly new to bioinformatics but I would like to ask you a question about identification of barcodes. I have a file which contains the results of a multiplex sequencing. I have to demultiplex a dataset without having the barcodes.
The question is how to identify the barcodes (3' adapters) which were used, to further identify the number of sequences that were sequenced from each sample? What algorithms can I use to solve this problem?