GDC-client download problem
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Entering edit mode
24 months ago
pandafish • 0

Hi,

Recently, i used gdc-client to download data and always interruptted by following error message like following!

[31mERROR: [0mAn unexpected error has occurred during normal operation of the client. Please report the following exception to GDC support support@nci-gdc.datacommons.io. [31mERROR: [0mIncompleteRead(40 bytes read, 88 more expected) Traceback (most recent call last): File "gdc-client", line 107, in <module>

*File "build/bdist.linux-x86_64/egg/gdc_client/download/parser.py", line 127, in download

File "build/bdist.linux-x86_64/egg/gdc_client/download/client.py", line 277, in download_small_groups

File "build/bdist.linux-x86_64/egg/gdc_client/download/client.py", line 246, in _download_tarfile

File "site-packages/requests/models.py", line 673, in generate

File "site-packages/requests/packages/urllib3/response.py", line 303, in stream

File "site-packages/requests/packages/urllib3/response.py", line 450, in read_chunked

File "site-packages/requests/packages/urllib3/response.py", line 411, in _handle_chunk

File "httplib.py", line 695, in _safe_read

IncompleteRead: IncompleteRead(40 bytes read, 88 more expected)

[31mERROR: [0mExiting*

By the way, is there any ways that resume downloading since i have downloaded few files or should i re-download?

Hope someone could help me out.

Best regards.

GDC TCGA • 1.5k views
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Entering edit mode
24 months ago

Please re-direct this to the GDC Support: https://gdc.cancer.gov/support

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