Update list of asseccion numbers
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2.0 years ago
hazirliver ▴ 10

Hello! I have a list with accession numbers, but some of the numbers on this list are out of date (they are "old version"). Are there any easy ways (using biopython or ready-made scripts) to update this list?

biopython python ncbi genbank accession number • 448 views
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There are a few posts about update of accession numbers in Biostar database,

I found some, but you may continue the search if it's not enough to you.

Go to the upper left corner of the page, press 'LATEST' and type your question:

'update of accession number'. In case there is no answer, replace your question to a few key words.

Also look at the right panel of any post you have opened (even of your own question) - you

may find some additional useful posts there.

A: GeneBank accession 2 Entrez gene id

The sequence changes with the refseq version

Update Biopython'S Seqrecords?

Do fasta files at ftp.ncbi ever change once uploaded?

Fetching Genbank Entries For List Of Accession Numbers.

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Thank you! I will try to find the answer there

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