Question: nanopor reads analysis using nanoplot
0
gravatar for firminlago
8 days ago by
firminlago0
firminlago0 wrote:

what are my doing wromg running this package from anaconda:

(base) name-System-Product-Name:~/anaconda3/pkgs/nanoplot-1.28.0-py_0/site-packages/nanoplot$ nanoplot --summary Soil1_sequencing_summary.txt --loglength -o summary-plots-log-transformed  

nanoplot: command not found
sequencing software error • 139 views
ADD COMMENTlink modified 6 days ago by lieven.sterck6.4k • written 8 days ago by firminlago0

You have send me an email and opened an issue on GitHub. Please be patient.

This is an issue of your conda installation and not specifically for NanoPlot.

ADD REPLYlink written 8 days ago by WouterDeCoster42k

have you tried adding to PATH?

ADD REPLYlink written 6 days ago by angus0
0
gravatar for WouterDeCoster
6 days ago by
Belgium
WouterDeCoster42k wrote:

Solved at https://github.com/wdecoster/NanoPlot/issues/161

ADD COMMENTlink written 6 days ago by WouterDeCoster42k
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