Similar posts • Search »

• Want to get advice on some trans-eQTL result
  Hi, Using MatrixEQTL R package, I am performing both cis and trans eQTL analyses in order to fin...
• Discussion on abundance of trans-eQTLs and almost no cis-eQTLs
  Hi, I have more of a philosophical question. I've seen papers which use skepticism in interpret...
• How to interpret the eQTLs in cancer
  According to the paper [PancanQTL: systematic identification of cis-eQTLs and trans-eQTLs in 33 c...
• Reproduction eQTL GTex Box plot
  HiI need to regenerate the eqtl boxplot graph forsome of my snps of interest. I can see the eqt...
• Are transcription factors some kind of eQTLs?
  Cause of working on Allele-Specific expression, working I am trying to know more about expression...
• how to verify cis-eQTL results
  I have performed a cis eQTL in tumor tissue in breast cancer, I got some results and I don't kn...
• If my qq-plot show system inflation?
  Hello, I am working on an eQTL project. I run the eQTL identification using MatrixEQTL. After I ...
• Cis- eQTL Question
  I'm trying to do a cis eqtl analysis, so I have a linear regression where gene expression is the ...
• GTEx files, single tissue cis-eQTLs
  Hi all, I'm using the GTEx analyzed files from single tissue eQTLs at https://www.gtexportal.org...
• Eqtl Analysis Of Snps And Cis- Or Trans-Related Genes
  Hello friends, recently I want to have a look at relationship between some disease related SNPs ...
• Eqtl Mapping Choice
  Hi all, I am mapping the SNP to gene expression to find the cis and trans eQTL. First I tried t...
• How to determine effect of SNP on the expression of pseudogene.
  Hi i am working on linkage of pseudogene to the progression of disease. I have list of pseudogene...
• cis-eQTL Results Visualization
  Hi Guys,   does some one know how to visualize cis-eQTL results?   I have found Reveal, ggbio...
• Tag Snp, Independent Gwas, Eqtl Results
  I seems many gwas/eqtl results does not report all associations, but only those independent featu...
• Multiple tissue eQTL list
  I know there is a similar question asked 3.7 years ago: a similar question. I'd like to see if th...
• How to determine a list of independat eQTLs?
  Hello, I have a list of 272 eQTLs. I used LDmatrix from https://ldlink.nci.nih.gov/ to calculate...
• How The Data Is Compiled For The Databases Eqtl At Prichard Lab And Gtex(Genotype Tissue Expression)
  Hi I am using the results from the two databases 1. eQTL at prichard lab 2. GTEx EQTL browser. In...
• Rfam Family Types
  Good afternoon from Barcelona, I would like to ask a little question that I cannot find on the I...