Question: Questions of rs17632542 in cis-eQTL-GTEx-V8
gravatar for Shicheng Guo
6 months ago by
Shicheng Guo8.2k
Shicheng Guo8.2k wrote:

Hi All,

I find a very confusing question about eQTL of rs17632542. rs17632542 was identified as a cis-eQTL to KLK3 (Adipose - Subcutaneous , see here). However, when I download the eQTL files (GTEx_Analysis_v8_eQTL.tar) from here, I cannot find this significant eQTL. I was wondering where I was wrong?


Update: problem sloved: grep chr19_50858501 Adipose_Subcutaneous.v8.signif_variant_gene_pairs.txt

v8 gtex eqtl rs17632542 • 162 views
ADD COMMENTlink modified 4 months ago by Biostar ♦♦ 20 • written 6 months ago by Shicheng Guo8.2k
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