Question: GMAP error in aligning EST dataset
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gravatar for nancy
9 months ago by
nancy0
nancy0 wrote:

Hi, 

I'm using gmap version 2017-11-15 but getting the following error while running it within the PASA pipeline. Any help would be really appreciated. 

Signal received: SIGSEGVCalling Access_emergency_cleanupProblem sequence: DV021311.1 (557 bp)

You may want to run 'ipcs -m' to see if any shared memory segments are still in useYou can remove a shared memory segment manually by doing 'ipcrm -m <shmid>' Problem sequence: DT947740.1 (328 bp)

You may want to run 'ipcs -m' to see if any shared memory segments are still in useYou can remove a shared memory segment manually by doing 'ipcrm -m <shmid>' Problem sequence: DV020903.1 (450 bp)

Problem sequence: DT947595.1 (543 bp) You may want to run 'ipcs -m' to see if any shared memory segments are still in useYou can remove a shared memory segment manually by doing 'ipcrm -m <shmid>'

Problem sequence: DV019953.1 (626 bp) You may want to run 'ipcs -m' to see if any shared memory segments are still in useYou can remove a shared memory segment manually by doing 'ipcrm -m <shmid>' Problem sequence: 

DV031177.1 (479 bp) You may want to run 'ipcs -m' to see if any shared memory segments are still in useYou may want to run 'ipcs -m' to see if any shared memory segments are still in useYou can remove a shared memory segment manually by doing 'ipcrm -m <shmid>'You may want to run 'ipcs -m' to see if any shared memory segments are still in useYou can remove a shared memory segment manually by doing 'ipcrm -m <shmid>' Problem sequence: You can remove a shared memory segment manually by doing 'ipcrm -m <shmid>'

pasa gmap • 241 views
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