Question: From where to get Sub-telomeric Region Coordinates/ sequences for each chromosome
gravatar for rohitsatyam102
7 months ago by
rohitsatyam102120 wrote:

Hi All!!

I have searched a lot on how to fetch the subtelomeric region sequences chromosome wise. However I am unable to do that. Does someone have some experience doing that. I referred to this paper Mapping and Initial Analysis of Human Subtelomeric Sequence Assemblies

However the following link from abovementioned paper gives me SRR files which on dumping gives me the following output





This is unusual.

I used the following command:

fastq-dump --outdir fastq --gzip --skip-technical  --origfmt --dumpcs --readids --read-filter pass --dumpbase --split-3 --clip SRR_ID
assembly chip-seq gene genome • 165 views
ADD COMMENTlink written 7 months ago by rohitsatyam102120
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