Question: Transcription factor target gene
0
gravatar for arifur.bpharm
9 weeks ago by
arifur.bpharm0 wrote:

How to find Transcription factor target gene? i am working on drosphila transcription factor and looking for target gene

chip-seq • 152 views
ADD COMMENTlink modified 9 weeks ago by michael.ante3.6k • written 9 weeks ago by arifur.bpharm0

For me (I'm not sure it is right), transcription factor target gene refers to those genes with that transcription factor located in regulatory regions responsible for their expression, you can generally call genes with that TF located in the promoter region as target genes

ADD REPLYlink written 9 weeks ago by yztxwd290
0
gravatar for michael.ante
9 weeks ago by
michael.ante3.6k
Austria/Vienna
michael.ante3.6k wrote:

I know about TRANSFAC as a database for transcription factor - gene interaction. For a short overview I'm just linking the wikipedia entry.

There is a free academic version at http://gene-regulation.com .

Nevertheless, I guess there are more databases out there describing the targets of transcription factors.

Cheers,

Michael

ADD COMMENTlink written 9 weeks ago by michael.ante3.6k
Please log in to add an answer.

Help
Access

Use of this site constitutes acceptance of our User Agreement and Privacy Policy.
Powered by Biostar version 2.3.0
Traffic: 1526 users visited in the last hour