Question

how can i find correlation between two pathway?

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4.3 years ago

ali.kian.saei ▴ 10

i want to find the way that can find the correlation between two pathway like exosome and autophagy in theri signalling and genes and poteins

pathway • 819 views

ADD COMMENT • link updated 4.3 years ago by Kevin Blighe 87k • written 4.3 years ago by ali.kian.saei ▴ 10

score 2 · Answer 1 · 2019-12-16

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4.3 years ago

Kevin Blighe 87k

Use GSVA (Bioconductor) to transform your Genes X Samples dataset into a Pathways X Samples dataset, and then perform differential pathway analysis and correlations.

Kevin

ADD COMMENT • link 4.3 years ago by Kevin Blighe 87k