Download pnly latest sequences from GenBank
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4.3 years ago
aquaq ▴ 40

Hi All,

I am developing a webserver that would run a pipeline at every update of GenBank. After every update, I would like to download only those sequences that were added during the last update. Is it possible to do programatically without downloading the whole database? If yes, how?

Thank you for any advice!

genbank • 806 views
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4.3 years ago
Xylanaser ▴ 80

https://www.ncbi.nlm.nih.gov/books/NBK279680/

update_blastdb.pl

check last paragraph ;) best wishes

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Thank you, I would have never searched for this there :) You saved me a lot of time!

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