I mapped reads onto a nuclear, chloroplast, and mitochondrial genome separately using bwa mem and then sorted using samtools. Entire genome: 179 Mb, chloroplast: 169Kb, mitochondria: 43Kb. The resulting bam files are all similar in sizes (23G, 27G, and 27G). Is their an error? Why would this be the case?
Question: Mapping reads to nuclear, chloroplast, and mitochondria genome separately but all resulting bam files are similar sizes
29 days ago by
kristina.mahan • 50
kristina.mahan • 50 wrote:
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