how to remove the overlap in the chromosome numbers?
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4.6 years ago
Chaimaa ▴ 260

Hello guys, I have generated a SCNA plot using an R script (gaiaCNVplot), but i found a problem in the x axis which indicate the chromosome numbers and shown in the below figure. The chromosome numbers overlap, so is there a way for the chromosome numbers to be spread out or at least legible ?

https://i.postimg.cc/c1cJqNK2/FIGURE4-Stage3.png

Apprecaite your help!

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4.6 years ago

Hello, the simplest thing to try is to make the use of width when you are generating the output file. For example:

pdf("out.pdf", width = 16, height = 5.5)
  <code>
dev.off()
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@ Hi Kevin, i have another question: is there a possibility to lined up this figure as to the position of each chromosome ?

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Hello, I am not sure what you mean?

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@ Hi Kevin, i mean if there is a way to lined up these chromosomes as i can compare each chromosome with any other chromosome from another stage for example visually ?

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