Consistency of LD in the two populations
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16 months ago
adele ▴ 60

I have two population. I used PLINK for calculating LD. The consistency of LD in the two populations is measured by the correlation of rLD of adjacent marker pairs on each autosome between the two populations. How do you calculate it in R? Can everybody explain more?

LD consistency • 335 views
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16 months ago
Yean ▴ 130

what about genetic package ?

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