Question: An error in using SRAtoolkit
gravatar for Andrew Liu
8 weeks ago by
Andrew Liu0
Andrew Liu0 wrote:

Here is an unknown error occurred when I use the latest version of SRAtoolkit.

Can't locate JSON/ in @INC (@INC contains: /usr/local/lib64/perl5 /usr/local/share/perl5 /usr/lib64/perl5/vendor_perl /usr/share/perl5/vendor_perl /usr/lib64/perl5 /usr/share/perl5 .) at ./prefetch line 12.
rna-seq next-gen genome • 140 views
ADD COMMENTlink modified 8 weeks ago by ATpoint30k • written 8 weeks ago by Andrew Liu0

It means that the indicated Perl module is missing. Is this the precompiled binary of the tool you are using? What is the command you run? Try installing JSON::PP, please use google for a how-to. Lots of posts on this out there.

ADD REPLYlink modified 8 weeks ago • written 8 weeks ago by ATpoint30k
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