Question: An error in using SRAtoolkit
gravatar for Andrew Liu
6 months ago by
Andrew Liu0
Andrew Liu0 wrote:

Here is an unknown error occurred when I use the latest version of SRAtoolkit.

Can't locate JSON/ in @INC (@INC contains: /usr/local/lib64/perl5 /usr/local/share/perl5 /usr/lib64/perl5/vendor_perl /usr/share/perl5/vendor_perl /usr/lib64/perl5 /usr/share/perl5 .) at ./prefetch line 12.
rna-seq next-gen genome • 187 views
ADD COMMENTlink modified 6 months ago by ATpoint36k • written 6 months ago by Andrew Liu0

It means that the indicated Perl module is missing. Is this the precompiled binary of the tool you are using? What is the command you run? Try installing JSON::PP, please use google for a how-to. Lots of posts on this out there.

ADD REPLYlink modified 6 months ago • written 6 months ago by ATpoint36k
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