Hello,
I am running into an issue when I run trimgalore that produces an error:
"Failed to execute Cutadapt porperly. Please install Cutadapt first and make sure it is in the PATH, or specify the path to the Cutadapt executable using --path_to_cutadapt /path/to/cutadapt"
I have cutadapt sourced in the path so when I run $cutadapt --version
from terminal it provides me with the correct version of 2.7. I have also tried modifying the --path_to_cutadapt
option for trimgalore to specify where it is but I receive the same error message.
Has anyone else run into this issue and solved it?
Thanks!