Question: Seurat heatmap across conditions
1
gravatar for V
4 weeks ago by
V200
UK/London
V200 wrote:

Hello,

I have a seurat object that has 3 conditions merged. When plotting feature plots I can split them using the " split.by = 'stim' " Would anyone know if there is a way to do this for heatmaps across the conditions for a defined set of genes?

Thanks

seurat single-cell rnaseq • 126 views
ADD COMMENTlink modified 4 weeks ago by Arup Ghosh2.1k • written 4 weeks ago by V200
2
gravatar for Arup Ghosh
4 weeks ago by
Arup Ghosh2.1k
India
Arup Ghosh2.1k wrote:

Provide a list of genes to features option and use group.by = 'stim' in Seurat DoHeatmap function.

ADD COMMENTlink modified 4 weeks ago • written 4 weeks ago by Arup Ghosh2.1k
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