Bedtools option suggestion
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18 months ago
K.Gee ▴ 40

Hi I have a file containing genes ids and its midpoint (let's say 11 ids). I read that bedtools can calculate the distances from gene 1 to gene 2, from 2 to gene 3 etc. to have 10 points afterward. Moreover, I read the bedtools manual, but I didn't understand which tools option is suitable for this task reldist looks an option, but still, it doesn't seem 100% to making what I want to do? Can anyone direct me/suggest the best options in bedtools? Thank you in advance.

bedtools genes coregenes • 286 views
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thank you very much for the response!

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