How to find a pathway from bacteria to disease
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4.9 years ago
eli_bayat ▴ 90

Hi, I want to find a pathway from bacteria to genes all the way to a disease. Is there any user friendly website that I can use? I looked into KEEG and it was confusing to me. Any other suggestion would be appreciated.

gene pathways KEEG disease bacteria • 1.1k views
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Is it a plant or an animal? For mouse, you can try MGI. It has information on genes-disease connection as well. For pathway, you can also try Reactome. Both are very user-friendly. Reactome has version of plants as well.

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Thanks Ashish! my species are bacteria

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4.9 years ago
Fatima ▴ 1000

https://sourceforge.net/projects/fun4me/ package will give you gene predictions, functional annotations from GO and metabolic pathways.

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