Question: denovo assembler for MobiSeq-whole genome sequencing data
gravatar for safiq713
8 months ago by
safiq7130 wrote:

Dear All,

I am new in NGS technology, So far i have ddRAD data, I mapped then closest relative species (it worked nicely). Now I got whole genome data from one of our collaborator of the same species. I think it will improve my results. this is a MobiSeq-whole genome sequencing data ( short Reads)

Question is; a. Which assembler could be the best choice? b.Is there any assembler where K-mer will be selected by itself?

suggestion and help please

denovo assembly • 96 views
ADD COMMENTlink modified 8 months ago • written 8 months ago by safiq7130
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