arrayQualityMetrics R for outlier detection
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4.2 years ago
lilly ▴ 10

Hi For outlier detection using arrayqualitymetrics R package, a different threshold was determined for different microarray datasets. For example, box plot outlier detection, a threshold of 0.163 was determined for one microarray dataset consisting of various samples and another different threshold. What can be the possible reason and can I keep a single threshold for the datasets consists of various samples?

microarray meta analysis • 739 views
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