Question: how to plot the genotype of every SNP
0
gravatar for Victor
12 months ago by
Victor10
Australia
Victor10 wrote:

Hi,

According to the post of Kevin Blighe, A: B allele frequency SNP array

I am wondering how to plot the genotype of every SNP for a single sample. Are there any R-packages can be used?

plot snp genotype allele R • 247 views
ADD COMMENTlink modified 12 months ago by AsoInfo300 • written 12 months ago by Victor10
1
gravatar for AsoInfo
12 months ago by
AsoInfo300
Bonn, Germany
AsoInfo300 wrote:

It depends on your input file format. Haploview can be used for showing the genotypes of SNP's along with the LD plot.

ADD COMMENTlink written 12 months ago by AsoInfo300
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