Entering edit mode
4.2 years ago
deniselavezzari
•
0
Hi! Is there a way to compare two vcf not only by position, but also for the genotypes? I want to extract from two vcf files the variants shared by both individuals, having not only the same position but also the same genotype. Thanks
merge your VCFs and filter. https://www.google.com/search?q=how+to+merge+vcf+site%3Abiostars.org
You can try this tool: https://github.com/imgag/ngs-bits/blob/master/doc/tools/SampleSimilarity/index.md