Hello fellow BioStars!
I've ben working for a time now using the CastEi and 129S5 sequences generated by the Mouse Genomes Project from the Sanger.
Something I've always wished for is to have a correspondence between the coordinates of the reference genome (C57Bl6) and these genomes, as it is useful for making quick table comparisons and computing other info. However, I do't seem to think on a way to perform this task, or if it has already been done.
Any ideas?? I'd appreciate very much all your comments.