I am looking for a RNA-seq data on CD34+ cells (human), to compare the expression of genes in my treatment sample and identify differentially regulated genes.
I know microarray data for CD34+ cells is available but I do not want to compound my problems by making a cross platform comparison.
Or am I missing something here when I am saying/thinking that a comparision of expression data from microarray with RNA-seq will not yield differentially regulated genes?
Or what will be your approach to solve this problem?
I have a RNA-seq profile for my treatment sample and microarray profile for my control sample.
I know it is a tricky one and many will down vote this question (It usually happens with my questions, don't know why? for example sometimes people don't understand what is peak file and they down vote the question).
Anyway, I still hope for an answer.
Thank you Note: GEO and Oncomine have been querried.