HTSeq --nonunique all does not work
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4.1 years ago
Rafael Soler ★ 1.2k

I am trying to perfrom this

htseq-count -f sam -r pos -s no --nonunique all L8523_Track-22622_R1_trimmed.sam Mus_musculus.GRCm38.99.gtf > L8523_Track-22622_R1_count.txt

but

htseq-count: error: no such option: --nonunique

what is happening??
RNA-Seq HTSeq --nonunique • 792 views
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Which version of htseq are you using?

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