I need a few suggestions from Cytoscape experts. I have qPCR results (60 genes) with fold change and log value too, and I want to perform enrichment analysis (gprofiler and Cytoscape or any software you can suggest). I have never done that kind of analysis before. I was watching people comments and videos but still, can’t figure out how to put my data for enrichment analysis in Cytoscape and how to camper group vice. I have this kind of data; please advise me how I can proceed better way to analysis.
g-A g-B g-C g-D g-E Foxo3 1 1.10558405 0.84134146 0.98463419 0.79779405 Foxo4 1 2.2111681 1.93289511 1.24056134 3.58197417 IL1b 1 5.4445345 0.34967745 0.74621318 0.64801013