To get a total combined Fasta file from nr.gz file
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13 months ago
dpktiwari168 ▴ 30

Hello,

I am trying to get a combined Fasta file for all the sequences that are present in the nr database. For that I have downloaded the nr database from ftp://ftp.ncbi.nlm.nih.gov/blast/db/FASTA/nr.gz.

I have unzipped the nr.gz file and then I have got a single nr file which is a binary file of 131.9 GB. I want to have all these files as a fasta File (.fasta file). How can I get that? Please suggest.

Thanks

alignment • 286 views
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if you unzip that file you should get a plain text (=FASTA ) file.

what program did you use to 'unzip' that file? (== you should use gzip )

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